refactor code. mainly organize files into folders

RQs/RQ0/RQ0_1_results_normalization.ipynb

@@ -2,7 +2,7 @@
  "cells": [
   {
    "cell_type": "code",
-   "execution_count": 5,
+   "execution_count": null,
    "id": "c2d824a6",
    "metadata": {},
    "outputs": [
@@ -139,13 +139,13 @@
     "\n",
     "    from stats_utils import normalize_and_slim_record\n",
     "\n",
-    "    IN_DIR = Path(r\"..\\..\\batch_results_gpt4o\")\n",
+    "    IN_DIR = Path(r\"..\\..\\model_PII_results\\gpt4o\")\n",
     "    RESULTS_DIR = Path(r\"normalized_PII_results\\gpt4o\\db_level\")\n",
     "    OUT_DIR = STATS_DIR/ RESULTS_DIR \n",
     "\n",
     "    normalize_jsonl_folder(IN_DIR, OUT_DIR, normalize_and_slim_record, delete_out_dir_first=True)\n",
     "    \n",
-    "    IN_DIR = Path(r\"..\\..\\ground_truth\")\n",
+    "    IN_DIR = Path(r\"..\\..\\model_PII_results\\ground_truth\")\n",
     "    RESULTS_DIR = Path(r\"normalized_PII_results\\ground_truth\\db_level\")\n",
     "    OUT_DIR = STATS_DIR/ RESULTS_DIR \n",
     "\n",

config.yaml

@@ -1,6 +1,7 @@
 db_dir: selectedDBs
 out_dir: batch_results
 config_py: my_run_config.py
+enable_observe: false
 pii_targets:
   - EMAIL
   - PHONE

my_run_config.py

@@ -1,6 +1,6 @@
 db_files = [
-    # "test2.db",
-    # "users.db",
+    "test2.db",
+    "users.db",
     # "A1_commerce.db",
     # "A1_msgstore.db",
     # "A1_wa.db",
@@ -8,24 +8,24 @@ db_files = [
     # "A2_journal.db",
     # "A2_main.db",
     # "A3_account1cache4.db",
-    "A3_account2cache4.db",
-    "A3_account3cache4.db",
-    "A4_gmm_myplaces.db",
-    "A4_gmm_storage.db",
-    "A4_peopleCache_sharononeil368@gmail.com_com.google_14.db",
-    "A5_SBrowser.db",
-    "A5_SBrowser2.db",
-    "A5_searchengine.db",
-    "I1_CallHistory.sqlite",
-    "I1_ChatStorage.sqlite",
-    "I1_ContactsV2.sqlite",
-    "I2_AddressBook.sqlitedb",
-    "I2_AddressBookImages.sqlitedb",
-    "I3_sms.db",
-    "I4_CloudTabs.db",
-    "I4_History.db",
-    "I5_Calendar.sqlitedb",
-    "I5_Extras.db", 
+    # "A3_account2cache4.db",
+    # "A3_account3cache4.db",
+    # "A4_gmm_myplaces.db",
+    # "A4_gmm_storage.db",
+    # "A4_peopleCache_sharononeil368@gmail.com_com.google_14.db",
+    # "A5_SBrowser.db",
+    # "A5_SBrowser2.db",
+    # "A5_searchengine.db",
+    # "I1_CallHistory.sqlite",
+    # "I1_ChatStorage.sqlite",
+    # "I1_ContactsV2.sqlite",
+    # "I2_AddressBook.sqlitedb",
+    # "I2_AddressBookImages.sqlitedb",
+    # "I3_sms.db",
+    # "I4_CloudTabs.db",
+    # "I4_History.db",
+    # "I5_Calendar.sqlitedb",
+    # "I5_Extras.db", 
 ]
 
 PII_CONFIG = {